STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53222.1Hypothetical protein; FIG00448168. (218 aa)    
Predicted Functional Partners:
AOP53219.1
Putative membrane protein.
 
  
 0.965
AOP53221.1
Hypothetical protein; FIG00448319.
 
     0.963
AOP53223.1
Putative integral membrane protein.
 
     0.950
AOP53220.1
MoxR-like ATPase.
       0.854
AOP53217.1
Putative integral membrane protein.
 
    0.776
AOP53216.1
Putative CONSERVED MEMBRANE PROTEIN.
 
    0.769
AOP53225.1
Sensor histidine kinase MtrB.
       0.699
AOP53226.1
Membrane spanning lipoprotein.
       0.699
AOP53227.1
Competence F-like protein, phosphoribosyltransferase domain; Protein YhgH required for utilization of DNA as sole source of carbon and energy.
       0.657
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
       0.592
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.