STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53283.1Carbon starvation protein A. (569 aa)    
Predicted Functional Partners:
AOP53281.1
Arsenical pump-driving ATPase.
     0.959
AOP53282.1
Hypothetical protein; FIG059250.
 
     0.956
AOP51819.1
Acetate permease ActP (cation/acetate symporter).
  
    0.549
AOP52317.1
Putative sialic acid transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.549
AOP55074.1
Sodium/iodide co-transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.549
AOP53284.1
Hypothetical protein.
       0.508
AOP53280.1
Alanine dehydrogenase.
       0.504
AOP53549.1
Methylated-DNA--protein-cysteine methyltransferase.
 
    0.497
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
  
 0.483
AOP53696.1
DNA polymerase III epsilon subunit-related protein.
     
 0.473
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.