STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53378.1Putative Vancomycin B-type resistance protein VanW. (585 aa)    
Predicted Functional Partners:
AOP53377.1
N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase MshB.
       0.834
AOP53376.1
GTP-binding protein TypA/BipA.
       0.752
AOP54559.1
D-alanyl-D-alanine carboxypeptidase.
 
     0.548
AOP52835.1
Membrane protein; FIG00732228.
  
     0.528
AOP53372.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
 
     0.521
AOP53696.1
DNA polymerase III epsilon subunit-related protein.
 
     0.510
AOP53987.1
Putative membrane protein.
  
     0.501
AOP53375.1
Hypothetical protein.
       0.492
AOP54647.1
Beta-hexosaminidase.
     
 0.485
AOP55287.1
Glucosyl-3-phosphoglycerate synthase.
 
     0.483
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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