STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53421.1Histidinol-phosphatase [alternative form]. (268 aa)    
Predicted Functional Partners:
AOP53422.1
Ribosome small subunit-stimulated GTPase EngC.
 
     0.876
AOP53423.1
5-Enolpyruvylshikimate-3-phosphate synthase.
       0.854
AOP53424.1
Hypothetical protein; FIG00448778.
       0.854
AOP53425.1
RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.752
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
 
 0.707
AOP53426.1
Hypothetical protein; FIG00447877.
       0.694
AOP53895.1
16S rRNA (cytosine(967)-C(5))-methyltransferase.
  
 
 0.684
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
 0.662
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Acting phosphoribosylanthranilate isomerase.
 
  
 0.645
AOP53420.1
Aminotransferase.
       0.643
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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