STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53498.1Glycoside hydrolase 15-related. (475 aa)    
Predicted Functional Partners:
AOP54676.1
Phosphoglyceromutase.
 
     0.703
AOP54104.1
Hypothetical protein.
 
     0.673
AOP54103.1
Virulence factor MVIN-like protein.
 
     0.646
AOP54675.1
Hypothetical protein.
 
     0.636
AOP55287.1
Glucosyl-3-phosphoglycerate synthase.
 
     0.636
AOP53782.1
Hypothetical protein; FIG00724150.
 
     0.620
AOP55137.1
Hypothetical protein; FIG00449467.
 
  
 0.595
AOP55531.1
Hypothetical protein; FIG00448096.
 
     0.594
AOP54105.1
Hypothetical protein; FIG007481.
  
     0.585
AOP52299.1
Peptidoglycan-binding domain 1 protein.
 
     0.531
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.