STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53683.1CblZ, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase. (204 aa)    
Predicted Functional Partners:
AOP53675.1
Transmembrane protein; Clustered with lipoate gene.
 
     0.848
AOP53689.1
Putative cytochrome c oxidase polypeptide IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
 
     0.800
crgA
Putative septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
  
     0.742
AOP52397.1
Hypothetical protein; FIG00447931.
  
     0.741
AOP54020.1
Hypothetical protein; FIG01121218.
  
     0.741
AOP54017.1
Hypothetical protein; FIG00448754.
  
     0.735
AOP53684.1
Peptidase M20.
       0.722
AOP53930.1
ATPase involved in DNA repair.
  
     0.707
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.693
AOP53700.1
Hypothetical protein; FIG00449129.
  
     0.681
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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