Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AOP53723.1Amino acid permease-associated region. (514 aa)    
Predicted Functional Partners:
AOP53724.1
Monoamine/putrescine oxidase.
 
   
 0.933
AOP53572.1
Universal stress protein family.
 
    0.819
AOP53722.1
Transcriptional regulator, AraC family.
 
     0.799
AOP51935.1
Universal stress protein family.
 
    0.797
AOP53720.1
Excinuclease ABC subunit A.
  
    0.718
AOP53721.1
Putative lyase.
  
    0.718
AOP53725.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.490
AOP54585.1
Cys-tRNA(Pro) deacylase YbaK.
 
     0.459
AOP55298.1
Agmatine deiminase; Belongs to the agmatine deiminase family.
 
   
 0.449
AOP54527.1
Transcriptional regulator, TetR family.
 
     0.440
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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