STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53724.1Monoamine/putrescine oxidase. (450 aa)    
Predicted Functional Partners:
AOP53723.1
Amino acid permease-associated region.
 
   
 0.929
AOP53572.1
Universal stress protein family.
 
     0.831
AOP51935.1
Universal stress protein family.
 
     0.772
AOP53722.1
Transcriptional regulator, AraC family.
       0.706
AOP53721.1
Putative lyase.
       0.658
AOP53720.1
Excinuclease ABC subunit A.
       0.652
AOP54586.1
Agmatinase; Belongs to the arginase family.
 
   
 0.579
AOP54527.1
Transcriptional regulator, TetR family.
 
     0.566
AOP52394.1
4-aminobutyraldehyde dehydrogenase.
   
 0.557
AOP55298.1
Agmatine deiminase; Belongs to the agmatine deiminase family.
 
   
 0.540
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.