STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53725.13-oxoacyl-[acyl-carrier protein] reductase. (331 aa)    
Predicted Functional Partners:
AOP53726.1
Transcriptional regulator, DeoR family.
 
     0.675
AOP52363.1
Carboxylesterase NP.
 
  0.563
AOP53888.1
Acetyl-coenzyme A carboxyl transferase beta chain.
  
  
 0.530
AOP53724.1
Monoamine/putrescine oxidase.
     
 0.524
AOP51856.1
Aldehyde dehydrogenase, PaaZ.
  
 0.508
AOP53723.1
Amino acid permease-associated region.
       0.490
AOP53722.1
Transcriptional regulator, AraC family.
       0.480
AOP55312.1
Haloalkane dehalogenase-like protein; AMP-dependent synthetase/ligase in alkane synthesis cluster.
  
 0.474
AOP53278.1
Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase.
 
  0.469
AOP52682.1
Enoyl-CoA hydratase [isoleucine degradation]; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase.
  
 0.468
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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