STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53726.1Transcriptional regulator, DeoR family. (314 aa)    
Predicted Functional Partners:
AOP52131.1
Putative DeoR-family transcriptional regulator.
  
     0.771
AOP53725.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.689
AOP54871.1
Putative DeoR-family transcriptional regulator.
  
     0.594
AOP52108.1
Transcriptional regulator, AraC family.
 
     0.549
AOP52346.1
Transcriptional regulator, AraC family.
 
     0.485
AOP53060.1
Transcriptional regulator, AraC family.
 
     0.481
AOP54862.1
Hypothetical protein.
 
     0.475
AOP53680.1
Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase.
 
     0.467
AOP53721.1
Putative lyase.
  
    0.443
AOP52109.1
Putative quinone binding protein.
 
     0.432
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.