STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rlpARare lipoprotein A precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (103 aa)    
Predicted Functional Partners:
AOP53736.1
Rare lipoprotein A precursor.
 
      0.875
AOP53728.1
Mobile element protein.
       0.777
AOP55017.1
Muramoyltetrapeptide carboxypeptidase.
 
 
 
 0.644
AOP51765.1
Cell division protein FtsI [Peptidoglycan synthetase].
  
 
 0.602
AOP54054.1
Cell division protein FtsI [Peptidoglycan synthetase].
  
 
 0.602
AOP55392.1
Cell division protein FtsI [Peptidoglycan synthetase].
  
 
 0.602
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
   
 
 0.598
AOP54591.1
Putative cell wall-binding protein.
  
 
 0.598
AOP52626.1
DNA polymerase III subunits gamma and tau.
   
 
 0.578
AOP52668.1
DNA polymerase III delta prime subunit.
   
 
 0.578
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.