STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53804.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
AOP53805.1
Protein of unknown function DUF606.
       0.757
AOP53803.1
Phosphoglycerate mutase family.
       0.720
AOP53890.1
Hypothetical protein; FIG00447567.
  
     0.717
AOP53800.1
Hypothetical protein; FIG00733655.
 
     0.714
AOP55000.1
Hypothetical protein.
  
     0.521
AOP53195.1
Hypothetical protein; FIG00449238.
  
     0.493
AOP53427.1
ATPases with chaperone activity, ATP-binding subunit; COG0542.
  
     0.450
AOP51760.1
Hypothetical protein; FIG00448453.
  
     0.416
AOP54676.1
Phosphoglyceromutase.
  
     0.414
AOP52743.1
ADP-ribose pyrophosphatase.
  
     0.413
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.