STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53835.1Hypothetical protein; FIG00448688. (70 aa)    
Predicted Functional Partners:
AOP53834.1
Hypothetical protein.
 
     0.942
AOP53836.1
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion.
       0.854
AOP53832.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
       0.600
AOP53831.1
Phosphohistidine phosphatase SixA; COG2062.
       0.567
AOP52717.1
Membrane-flanked domain.
 
     0.562
AOP53833.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.547
AOP53510.1
Membrane protein, putative.
  
     0.530
AOP52716.1
Transmembrane protein.
 
     0.488
AOP55048.1
Phosphate transport regulator.
  
     0.479
AOP52905.1
Putative integral membrane protein.
  
     0.415
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.