Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOP53423.1 | AOP53916.1 | BLSMQ_1713 | BLSMQ_2210 | 5-Enolpyruvylshikimate-3-phosphate synthase. | Shikimate 5-dehydrogenase I alpha. | 0.828 |
| AOP53423.1 | aroB | BLSMQ_1713 | BLSMQ_2206 | 5-Enolpyruvylshikimate-3-phosphate synthase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.991 |
| AOP53423.1 | aroC | BLSMQ_1713 | BLSMQ_2208 | 5-Enolpyruvylshikimate-3-phosphate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.978 |
| AOP53423.1 | aroK | BLSMQ_1713 | BLSMQ_2207 | 5-Enolpyruvylshikimate-3-phosphate synthase. | Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.937 |
| AOP53423.1 | trpC | BLSMQ_1713 | BLSMQ_2176 | 5-Enolpyruvylshikimate-3-phosphate synthase. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.587 |
| AOP53910.1 | AOP53915.1 | BLSMQ_2204 | BLSMQ_2209 | Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Hypothetical protein. | 0.536 |
| AOP53910.1 | AOP53916.1 | BLSMQ_2204 | BLSMQ_2210 | Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Shikimate 5-dehydrogenase I alpha. | 0.645 |
| AOP53910.1 | AOP53918.1 | BLSMQ_2204 | BLSMQ_2212 | Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Putative Holliday junction resolvase YggF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.524 |
| AOP53910.1 | alaS | BLSMQ_2204 | BLSMQ_2213 | Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.542 |
| AOP53910.1 | aroB | BLSMQ_2204 | BLSMQ_2206 | Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.627 |
| AOP53910.1 | aroC | BLSMQ_2204 | BLSMQ_2208 | Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.537 |
| AOP53910.1 | aroK | BLSMQ_2204 | BLSMQ_2207 | Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.667 |
| AOP53910.1 | mltG | BLSMQ_2204 | BLSMQ_2211 | Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | YceG-like protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.524 |
| AOP53915.1 | AOP53910.1 | BLSMQ_2209 | BLSMQ_2204 | Hypothetical protein. | Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.536 |
| AOP53915.1 | AOP53916.1 | BLSMQ_2209 | BLSMQ_2210 | Hypothetical protein. | Shikimate 5-dehydrogenase I alpha. | 0.856 |
| AOP53915.1 | AOP53918.1 | BLSMQ_2209 | BLSMQ_2212 | Hypothetical protein. | Putative Holliday junction resolvase YggF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.801 |
| AOP53915.1 | alaS | BLSMQ_2209 | BLSMQ_2213 | Hypothetical protein. | Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.801 |
| AOP53915.1 | aroB | BLSMQ_2209 | BLSMQ_2206 | Hypothetical protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.671 |
| AOP53915.1 | aroC | BLSMQ_2209 | BLSMQ_2208 | Hypothetical protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.851 |
| AOP53915.1 | aroK | BLSMQ_2209 | BLSMQ_2207 | Hypothetical protein. | Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.813 |
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