STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53946.1ATP/GTP-binding integral membrane protein. (336 aa)    
Predicted Functional Partners:
AOP54555.1
Succinate dehydrogenase cytochrome b-556 subunit.
 
   
 0.877
AOP54558.1
Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
    0.858
AOP54556.1
Succinate dehydrogenase hydrophobic membrane anchor protein.
 
     0.855
AOP54557.1
Succinate dehydrogenase flavoprotein subunit.
 
    0.833
AOP53906.1
Integral membrane protein related to pyrimidine synthesis; FIG024784.
 
    0.798
AOP53774.1
Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster.
 
     0.777
AOP54182.1
RecA/RadA recombinase.
  
     0.775
AOP54232.1
Hypothetical protein; FIG00820747.
  
     0.775
AOP53948.1
Magnesium and cobalt efflux protein CorC.
       0.599
ybeY
Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.599
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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