Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AOP53962.1ComEC/Rec2-related protein. (754 aa)    
Predicted Functional Partners:
AOP53961.1
DNA polymerase III delta subunit.
    
 0.930
AOP53963.1
comE operon protein 1, putative.
 
  
 0.903
AOP54279.1
Rossmann fold nucleotide-binding protein Smf; Possibly involved in DNA uptake.
 
  
 0.769
AOP53227.1
Competence F-like protein, phosphoribosyltransferase domain; Protein YhgH required for utilization of DNA as sole source of carbon and energy.
 
  
 0.749
AOP54209.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
 
  
 0.647
AOP54280.1
MG(2+) chelatase family protein; ComM-related protein.
 
  
 0.637
AOP53965.1
UDP-glucose dehydrogenase.
     
 0.631
AOP53964.1
Putative DUF194, DegV family protein.
       0.620
AOP52251.1
Hypothetical protein.
  
  
 0.615
AOP54023.1
HigA protein (antitoxin to HigB).
  
  
 0.615
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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