STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53965.1UDP-glucose dehydrogenase. (435 aa)    
Predicted Functional Partners:
AOP54904.1
UTP--glucose-1-phosphate uridylyltransferase.
 
 
 0.798
AOP53964.1
Putative DUF194, DegV family protein.
       0.773
AOP54680.1
Glycosyl transferase, group 1.
 
  
 0.711
AOP54553.1
Mannose-1-phosphate guanylyltransferase (GDP).
 
  
 0.710
AOP53963.1
comE operon protein 1, putative.
       0.669
AOP53854.1
Glucose-6-phosphate isomerase.
  
 
 0.645
AOP53962.1
ComEC/Rec2-related protein.
       0.621
AOP52582.1
Hypothetical protein.
  
 
 0.601
AOP52583.1
Hypothetical protein; FIG00512580.
  
 
 0.601
AOP54758.1
UDP-glucose 4-epimerase.
  
 0.575
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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