STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53981.1ABC transporter ATP-binding protein. (555 aa)    
Predicted Functional Partners:
AOP53980.1
tRNA dihydrouridine synthase B.
 
    0.692
AOP53979.1
dNTP triphosphohydrolase, broad substrate specificity, subgroup 2; Belongs to the dGTPase family. Type 2 subfamily.
       0.620
AOP53978.1
DNA primase.
       0.608
AOP53308.1
Sulfur carrier protein adenylyltransferase ThiF.
  
   0.542
AOP53580.1
Sulfur carrier protein adenylyltransferase ThiF.
  
   0.542
AOP54245.1
tRNA pseudouridine synthase B.
 
   0.516
AOP53977.1
Transcriptional regulator, TetR family.
     
 0.515
AOP53401.1
Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
 
 
 0.495
AOP54664.1
TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA.
 
     0.495
AOP55498.1
Thiosulfate sulfurtransferase, rhodanese.
   
   0.494
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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