STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53982.1Transcriptional regulator. (182 aa)    
Predicted Functional Partners:
AOP52573.1
Cys-tRNA(Pro) deacylase YbaK.
 
     0.717
AOP53542.1
Hypothetical protein; FIG00452993.
 
    0.665
AOP55003.1
Putative DNA-binding protein in cluster with Type I restriction-modification system.
 
  
0.616
AOP53983.1
L-lactate permease.
       0.583
AOP53448.1
Putative transcriptional regulator.
 
  
 0.541
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
   0.540
AOP53114.1
Acetoacetyl-CoA synthetase.
   
   0.540
AOP55316.1
Propionate--CoA ligase; Acetyl-coenzyme A synthetase.
   
   0.540
AOP55528.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
   
   0.540
AOP53207.1
Hypothetical protein.
   
   0.538
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.