STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54019.1Membrane protein, putative. (151 aa)    
Predicted Functional Partners:
AOP54016.1
Hypothetical protein.
       0.715
AOP54017.1
Hypothetical protein; FIG00448754.
       0.715
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.715
AOP54232.1
Hypothetical protein; FIG00820747.
  
     0.650
AOP53774.1
Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster.
  
     0.616
AOP53906.1
Integral membrane protein related to pyrimidine synthesis; FIG024784.
  
     0.580
AOP54182.1
RecA/RadA recombinase.
  
     0.570
AOP54551.1
Basic membrane lipoprotein.
  
     0.558
AOP53815.1
DNA polymerase IV-like protein ImuB.
  
     0.511
AOP54556.1
Succinate dehydrogenase hydrophobic membrane anchor protein.
  
     0.504
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.