STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54023.1HigA protein (antitoxin to HigB). (357 aa)    
Predicted Functional Partners:
AOP54020.1
Hypothetical protein; FIG01121218.
 
     0.719
AOP54017.1
Hypothetical protein; FIG00448754.
 
     0.705
AOP54065.1
Putative regulatory protein; FIG00996715.
  
     0.702
AOP54748.1
Putative integral membrane protein.
 
     0.688
AOP54041.1
Hypothetical protein; FIG055075; Possibly a cell division protein, antigen 84 in Mycobacteria.
 
     0.682
AOP53779.1
Twin-arginine translocation protein TatA.
 
     0.680
whiA
Cytoplasmic hypothetical protein; Involved in cell division and chromosome segregation.
 
   
 0.662
hemH
Ferrochelatase, protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.648
AOP54061.1
Putative CONSERVED TRANSMEMBRANE PROTEIN.
  
     0.647
AOP53603.1
Hypothetical protein; FIG00820627.
  
     0.632
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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