Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AOP54158.1Mobile element protein. (248 aa)    
Predicted Functional Partners:
AOP54157.1
Mobile element protein.
 
   0.951
AOP51900.1
Mobile element protein.
 
   0.794
AOP52002.1
Mobile element protein.
 
   0.794
AOP52211.1
Mobile element protein.
 
   0.794
AOP52243.1
Mobile element protein.
 
   0.794
AOP52297.1
Mobile element protein.
 
   0.794
AOP52860.1
Mobile element protein.
 
   0.794
AOP53126.1
Mobile element protein.
 
   0.794
AOP53565.1
Mobile element protein.
 
   0.794
AOP54572.1
Mobile element protein.
 
   0.794
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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