Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOP54160.1 | AOP54161.1 | BLSMQ_2454 | BLSMQ_2455 | Hypothetical protein. | Ubiquinone biosynthesis monooxygenase UbiB. | 0.461 |
AOP54161.1 | AOP54160.1 | BLSMQ_2455 | BLSMQ_2454 | Ubiquinone biosynthesis monooxygenase UbiB. | Hypothetical protein. | 0.461 |
AOP54161.1 | AOP54162.1 | BLSMQ_2455 | BLSMQ_2456 | Ubiquinone biosynthesis monooxygenase UbiB. | Hypothetical protein. | 0.553 |
AOP54161.1 | AOP55339.1 | BLSMQ_2455 | BLSMQ_3641 | Ubiquinone biosynthesis monooxygenase UbiB. | Aminodeoxychorismate lyase. | 0.437 |
AOP54161.1 | vapC | BLSMQ_2455 | BLSMQ_2457 | Ubiquinone biosynthesis monooxygenase UbiB. | VapC toxin protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.529 |
AOP54162.1 | AOP54161.1 | BLSMQ_2456 | BLSMQ_2455 | Hypothetical protein. | Ubiquinone biosynthesis monooxygenase UbiB. | 0.553 |
AOP54162.1 | vapC | BLSMQ_2456 | BLSMQ_2457 | Hypothetical protein. | VapC toxin protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.910 |
AOP55339.1 | AOP54161.1 | BLSMQ_3641 | BLSMQ_2455 | Aminodeoxychorismate lyase. | Ubiquinone biosynthesis monooxygenase UbiB. | 0.437 |
vapC | AOP54161.1 | BLSMQ_2457 | BLSMQ_2455 | VapC toxin protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Ubiquinone biosynthesis monooxygenase UbiB. | 0.529 |
vapC | AOP54162.1 | BLSMQ_2457 | BLSMQ_2456 | VapC toxin protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein. | 0.910 |