STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54215.1Signal transduction histidine kinase CitA regulating citrate metabolism. (567 aa)    
Predicted Functional Partners:
AOP54214.1
Response regulator CitB of citrate metabolism.
     0.965
AOP54216.1
CitH citrate transporter.
 
     0.808
AOP52260.1
Response regulator receiver.
     0.803
AOP55393.1
Response regulator receiver.
     0.803
AOP53600.1
EAL domain protein.
  
 
 0.702
AOP54217.1
UspA.
       0.518
AOP52287.1
Malate Na(+) symporter.
 
     0.515
AOP53428.1
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; 2-oxoglutarate dehydrogenase E1 component.
   
 0.503
AOP52529.1
Response regulator receiver:Transcriptional regulatory protein, C- terminal.
  
   0.478
AOP52926.1
Putative two-component system response regulator.
  
   0.478
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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