STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54218.1Glycolate dehydrogenase, iron-sulfur subunit GlcF. (461 aa)    
Predicted Functional Partners:
AOP54220.1
Glycolate dehydrogenase, subunit GlcD.
    0.973
AOP54219.1
Glycolate dehydrogenase, FAD-binding subunit GlcE.
    0.923
AOP54558.1
Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
   0.915
AOP52557.1
Glycolate oxidase subunit.
    0.843
AOP54403.1
Putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF.
 
 
 0.832
AOP55474.1
Glycolate dehydrogenase, subunit GlcD.
    0.815
AOP54404.1
Putative L-lactate dehydrogenase, hypothetical protein subunit YkgG.
 
 0.791
AOP54222.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.606
AOP52682.1
Enoyl-CoA hydratase [isoleucine degradation]; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase.
  
  
 0.527
AOP54221.1
Malate synthase; Belongs to the malate synthase family.
  
  
 0.527
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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