Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AOP54308.1ABC amino acid transporter, extracellular solute binding component. (293 aa)    
Predicted Functional Partners:
AOP54310.1
ABC amino acid transporter, permease component.
 
 
 0.995
AOP54309.1
ABC amino acid transporter, permease component.
 
 
 0.994
AOP54311.1
Amino acid ABC transporter, ATP-binding protein.
 
  
 0.940
AOP55118.1
ABC transporter permease protein.
 
  
 0.712
AOP52483.1
Polar amino acid ABC transporter, inner membrane subunit.
 
  
 0.665
AOP54307.1
Transcriptional regulator, GntR family.
 
     0.602
AOP53592.1
ABC-type amino acid transport system, permease component.
 
  
 0.579
AOP53098.1
Ectoine hydroxylase.
 
   
 0.552
AOP52482.1
ATPase component CbiO of energizing module of cobalt ECF transporter.
 
  
 0.550
AOP54305.1
Putative integral membrane transport protein.
       0.547
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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