STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54370.1Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1. (327 aa)    
Predicted Functional Partners:
AOP54369.1
Oligopeptide transport system permease protein OppC; TCDB 3.A.1.5.1.
 
 0.996
AOP54367.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA; TCDB 3.A.1.5.1.
 
 0.994
AOP54368.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
  
 0.963
AOP53065.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
  
 0.858
AOP52579.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
  
 0.854
AOP53001.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
  
 0.854
AOP54782.1
Oligopeptide transport system permease protein OppC; TCDB 3.A.1.5.1.
  
 0.852
AOP53064.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
  
 0.849
AOP53373.1
Oligopeptide transport system permease protein OppC; TCDB 3.A.1.5.1.
  
 0.845
AOP53063.1
Oligopeptide transport ATP-binding protein OppF; TCDB 3.A.1.5.1; Belongs to the ABC transporter superfamily.
  
 0.837
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.