STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54442.1Mobile element protein. (99 aa)    
Predicted Functional Partners:
AOP54443.1
Mobile element protein.
       0.789
AOP52871.1
Mobile element protein.
 
     0.705
AOP54142.1
Mobile element protein.
 
     0.644
AOP54565.1
Mobile element protein.
  
     0.611
AOP52879.1
Mobile element protein.
  
     0.606
AOP54441.1
Transcriptional regulator, AraC family.
 
     0.595
AOP54440.1
ABC transporter (iron.B12.siderophore.hemin), periplasmic substrate-binding component.
 
     0.546
AOP54438.1
ABC transporter (iron.B12.siderophore.hemin), ATP-binding component.
 
     0.437
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.