STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54522.1Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase. (652 aa)    
Predicted Functional Partners:
AOP54523.1
Hypothetical protein.
       0.792
AOP55398.1
Copper(I) chaperone CopZ.
 
 
 0.730
AOP54521.1
Chromate transport protein ChrA.
       0.597
AOP53635.1
Copper chaperone.
  
 
 0.594
AOP55397.1
Repressor CsoR of the copZA operon.
 
  
 0.539
AOP54524.1
Histone acetyltransferase HPA2-related acetyltransferase.
 
     0.502
AOP54450.1
Hypothetical protein.
  
  
 0.497
AOP55197.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase.
  
    0.487
AOP55374.1
Copper resistance protein CopD; Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein.
     
 0.453
AOP53151.1
GTP cyclohydrolase II; 5-amino-6-(5-phosphoribosylamino)uracil reductase.
  
    0.444
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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