STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54648.1Multiple polyol-specific dehydrogenase; Belongs to the mannitol dehydrogenase family. (506 aa)    
Predicted Functional Partners:
AOP54651.1
Various polyols ABC transporter, periplasmic substrate-binding protein.
 
    0.882
AOP54649.1
Various polyols ABC transporter, permease component 2.
 
  
 0.873
AOP54650.1
Various polyols ABC transporter, permease component 1.
 
    0.858
AOP54653.1
Xylulose kinase.
 
   
 0.742
AOP54652.1
Sorbitol operon transcription regulator.
 
     0.682
AOP51785.1
Oxidoreductase.
 
   
 0.587
AOP54713.1
Sucrose operon repressor ScrR, LacI family.
 
   
 0.576
AOP54970.1
Maltose operon transcriptional repressor MalR, LacI family.
 
   
 0.573
AOP54971.1
Maltose operon transcriptional repressor MalR, LacI family.
 
   
 0.567
AOP53295.1
Fructokinase.
 
   
 0.561
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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