STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54712.1L-arabinose-binding periplasmic protein precursor AraF; TCDB 3.A.1.2.2. (364 aa)    
Predicted Functional Partners:
AOP54710.1
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.978
AOP54711.1
ATP binding protein.
  
 0.966
AOP51786.1
Ribose ABC transport system, ATP-binding protein RbsA; TCDB 3.A.1.2.1.
  
 0.878
AOP51787.1
Ribose ABC transport system, permease protein RbsC; TCDB 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.813
AOP51788.1
Ribose ABC transport system, permease protein RbsC; TCDB 3.A.1.2.1.
 
   
 0.811
AOP54713.1
Sucrose operon repressor ScrR, LacI family.
 
   
 0.749
AOP51789.1
Ribose ABC transporter, periplasmic ribose-binding protein RbsB; TCDB 3.A.1.2.1.
 
  
 0.611
AOP54653.1
Xylulose kinase.
 
   
 0.605
AOP54651.1
Various polyols ABC transporter, periplasmic substrate-binding protein.
 
  
 0.575
AOP54970.1
Maltose operon transcriptional repressor MalR, LacI family.
 
   
 0.564
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.