STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54835.1Amidases related to nicotinamidase. (212 aa)    
Predicted Functional Partners:
AOP54834.1
Transcriptional regulator, AraC family.
 
    0.933
AOP55095.1
Transcriptional regulator, AraC family.
 
    0.717
AOP51828.1
Hypothetical protein; FIG00723212.
 
    0.570
AOP53808.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.554
AOP54441.1
Transcriptional regulator, AraC family.
 
    0.538
AOP52786.1
Menaquinone-specific isochorismate synthase.
    
 0.517
AOP53137.1
PF00070 family, FAD-dependent NAD(P)-disulfide oxidoreductase.
  
    0.470
AOP52291.1
NAD(P)H oxidoreductase YRKL.
 
     0.469
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
   0.449
AOP55177.1
Acetophenone carboxylase subunit Apc4.
 
     0.439
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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