STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54888.1Ribosomal-protein-alanine acetyltransferase. (189 aa)    
Predicted Functional Partners:
AOP54889.1
Cystathionine gamma-synthase.
       0.781
AOP54890.1
LysR family transcriptional regulator YeiE.
       0.643
AOP54887.1
Enoyl-CoA hydratase.
       0.489
AOP54891.1
Putative membrane protein YeiH.
       0.477
AOP54664.1
TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA.
  
  
 0.474
AOP53379.1
Histone acetyltransferase HPA2-related acetyltransferase.
 
    0.472
AOP54077.1
Non-ribosomal peptide synthetase, terminal component.
     
 0.465
AOP54666.1
NAD(P)HX dehydratase.
  
    0.429
AOP53138.1
Macrolide 2'-phosphotransferase.
 
 
   0.412
cmk
Cytidylate kinase.
  
    0.410
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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