STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54907.1Heat shock protein 22.5 (Hsp22.5). (209 aa)    
Predicted Functional Partners:
AOP53240.1
Hypothetical protein; FIG00390190.
  
  
 0.675
AOP54612.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
  
  
 0.672
mscL
Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.637
AOP54614.1
Putative membrane protein.
  
  
 0.620
AOP52654.1
Septum site-determining protein MinD.
 
   
 0.612
AOP52656.1
Hypothetical protein; FIG00448048.
 
  
 0.603
AOP52657.1
Integral membrane protein.
  
  
 0.547
AOP54611.1
Flp pilus assembly protein TadB.
  
  
 0.547
AOP54906.1
Hypothetical protein.
       0.516
AOP52655.1
Flp pilus assembly protein, ATPase CpaF.
  
  
 0.491
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.