STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54910.1Superfamily I DNA and RNA helicase and helicase subunits. (1718 aa)    
Predicted Functional Partners:
AOP53407.1
Macrolide 2'-phosphotransferase.
 
     0.780
AOP54909.1
Hypothetical protein.
       0.773
AOP54396.1
Hypothetical protein; FIG00449326.
  
     0.682
AOP54614.1
Putative membrane protein.
 
     0.654
AOP54267.1
Hypothetical protein; FIG00448187.
 
     0.641
AOP53490.1
Hypothetical protein; FIG00449204.
  
     0.623
AOP53427.1
ATPases with chaperone activity, ATP-binding subunit; COG0542.
 
     0.594
AOP54151.1
ATPase.
  
    0.588
AOP54687.1
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion.
 
     0.588
AOP52887.1
Twin-arginine translocation protein TatB.
 
     0.578
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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