STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54952.1Putative secreted protein. (264 aa)    
Predicted Functional Partners:
AOP54680.1
Glycosyl transferase, group 1.
      0.878
AOP54953.1
Putative lipase/esterase.
       0.785
AOP55390.1
L-gulono-1,4-lactone oxidase.
 
     0.662
AOP52902.1
Hypothetical protein; Belongs to the UPF0336 family.
 
     0.599
AOP51775.1
DNA polymerase I.
 
     0.578
AOP53190.1
Adenylate cyclase.
 
     0.533
AOP54065.1
Putative regulatory protein; FIG00996715.
  
     0.528
AOP54950.1
Hypothetical protein; FIG00448855.
       0.525
AOP54929.1
Hypothetical protein; FIG00447562.
 
     0.519
AOP54951.1
N-acetylglucosamine-6-phosphate deacetylase.
       0.518
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.