STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54999.1Alpha/beta hydrolase fold. (271 aa)    
Predicted Functional Partners:
AOP55000.1
Hypothetical protein.
       0.816
AOP54998.1
Glycosyltransferase MshA involved in mycothiol biosynthesis.
  
    0.788
AOP54996.1
Hypothetical protein.
       0.677
AOP54997.1
Uncharacterized protein; Rv0487/MT0505 clustered with mycothiol biosynthesis gene.
       0.670
AOP55002.1
Putative membrane protein; FIG01200701.
       0.473
AOP55001.1
Hypothetical protein.
       0.451
AOP55453.1
2,4-dienoyl-CoA reductase [NADPH].
  
 
 0.449
pheT
Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
    0.408
AOP51818.1
Butyryl-CoA dehydrogenase.
  
  0.407
AOP51996.1
Butyryl-CoA dehydrogenase.
  
  0.407
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.