STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55061.1Phage major capsid protein. (278 aa)    
Predicted Functional Partners:
AOP55058.1
Phage terminase, large subunit.
 
     0.898
AOP55059.1
Phage capsid and scaffold.
 
     0.896
AOP53664.1
Phage terminase, large subunit.
 
     0.802
AOP54602.1
Phage terminase, large subunit.
 
     0.802
AOP55062.1
Hypothetical protein.
       0.801
AOP53663.1
Phage capsid and scaffold.
 
     0.800
AOP54601.1
Phage capsid and scaffold.
 
     0.800
AOP55063.1
Hypothetical protein.
       0.773
AOP54427.1
Phage terminase, large subunit Pham2.
 
     0.763
AOP55060.1
Hypothetical protein.
       0.560
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.