Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AOP55070.1Salicylate hydroxylase. (417 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
    0.691
AOP55071.1
Hypothetical protein.
       0.541
AOP54810.1
Cytochrome P450; COG2124.
  
 
 0.448
AOP53151.1
GTP cyclohydrolase II; 5-amino-6-(5-phosphoribosylamino)uracil reductase.
  
  
 0.446
AOP52521.1
Homoprotocatechuate 2,3-dioxygenase.
     
 0.444
AOP52518.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
  
  
 0.432
AOP52444.1
Hypothetical protein.
   
 0.429
AOP52575.1
Thioredoxin reductase.
   
 0.429
AOP52734.1
Methyltransferase type 11.
   
 0.429
AOP52735.1
Putative methyltransferase.
   
 0.429
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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