STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55087.1Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase. (261 aa)    
Predicted Functional Partners:
AOP55085.1
Two-component sensor histidine kinase.
       0.552
AOP55486.1
Putative secreted protein.
 
 
   0.548
AOP55084.1
Two-component response regulator.
       0.537
AOP55484.1
Putative secreted protein.
 
 
   0.533
AOP55086.1
Hypothetical protein.
       0.524
AOP55324.1
Putative secreted protein.
 
 
   0.514
AOP54246.1
Putative peptidase.
 
 
   0.433
AOP55083.1
Hypothetical protein.
       0.430
AOP55069.1
Transcriptional regulator, MarR family.
 
     0.421
AOP55080.1
ABC transporter, transmembrane region.
       0.412
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.