STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55093.1Threonyl-tRNA synthetase; COG0441. (104 aa)    
Predicted Functional Partners:
AOP55091.1
Permease of the major facilitator superfamily.
       0.604
AOP55092.1
4-hydroxyphenylpyruvate dioxygenase.
       0.569
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
     
 0.468
AOP55088.1
Quinate/shikimate 5-dehydrogenase I delta.
       0.456
AOP53436.1
Antirestriction protein ArdA.
  
    0.440
AOP54427.1
Phage terminase, large subunit Pham2.
  
    0.440
AOP54617.1
Cell division protein FtsK.
  
    0.436
AOP52094.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
     
 0.435
AOP53962.1
ComEC/Rec2-related protein.
     
 0.435
AOP53451.1
Hypothetical protein.
  
    0.411
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.