STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55106.1Amino acid permease. (499 aa)    
Predicted Functional Partners:
AOP54419.1
Cytosine/purine/uracil/thiamine/allantoin permease family protein.
 
    0.595
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
   
   0.573
AOP52118.1
Amino acid permease-associated region.
  
     0.565
AOP52442.1
Amino acid permease family protein.
  
     0.555
AOP52012.1
Endonuclease.
 
 
  0.543
AOP55461.1
Putrescine importer.
  
     0.526
AOP54421.1
Transcriptional regulator, AsnC family.
 
     0.522
AOP55105.1
CAAX amino terminal protease family protein.
       0.496
AOP54982.1
Aromatic amino acid transport protein AroP.
 
     0.448
AOP54586.1
Agmatinase; Belongs to the arginase family.
 
  
 0.436
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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