STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55147.1Hypothetical protein. (453 aa)    
Predicted Functional Partners:
AOP53600.1
EAL domain protein.
     
 0.483
AOP54617.1
Cell division protein FtsK.
   
 
 0.435
AOP51752.1
Tricorn protease-like 1.
  
   0.427
AOP55146.1
TolA protein.
      
0.425
AOP52251.1
Hypothetical protein.
  
 
 0.410
AOP54023.1
HigA protein (antitoxin to HigB).
  
 
 0.410
AOP53029.1
Outer membrane stress sensor protease DegS.
  
 
 0.405
AOP54188.1
Hypothetical protein; FIG00449328.
  
 
 0.405
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.