STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55160.1Zinc ABC transporter, periplasmic-binding protein ZnuA. (314 aa)    
Predicted Functional Partners:
AOP55162.1
Zinc ABC transporter, inner membrane permease protein ZnuB.
  
 0.970
AOP55161.1
Zinc ABC transporter, inner membrane permease protein ZnuB.
    0.953
AOP55163.1
Zinc ABC transporter, ATP-binding protein ZnuC.
 
  
 0.927
AOP55159.1
Putative secreted protein.
  
 0.913
AOP52832.1
Manganese ABC transporter, inner membrane permease protein SitD.
  
 0.868
AOP52082.1
Manganese ABC transporter, inner membrane permease protein SitD.
  
 0.867
AOP52831.1
Manganese ABC transporter, ATP-binding protein SitB.
 
  
 0.812
AOP52083.1
Manganese ABC transporter, ATP-binding protein SitB.
 
  
 0.791
AOP52634.1
Zinc ABC transporter, inner membrane permease protein ZnuB.
 
  
 0.542
AOP55166.1
Zinc uptake regulation protein ZUR.
  
  
 0.526
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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