STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55243.1Putative two-component system sensor kinase. (446 aa)    
Predicted Functional Partners:
AOP55244.1
DNA-binding response regulator, LuxR family.
 
 
 0.933
AOP53161.1
Putative two-component system response regulator.
 
 
 0.782
AOP55236.1
Putative two-component system response regulator.
 
 
 0.774
AOP53230.1
Two component response regulator MppU.
 
 
 0.772
AOP55434.1
Putative two-component system response regulator.
 
 
 0.763
AOP53231.1
Two-component system sensor kinase.
  
     0.759
AOP52592.1
DNA-binding response regulator, LuxR family.
 
 
 0.749
AOP53130.1
Putative two-component system response regulator.
 
 
 0.730
AOP55099.1
Response regulatory protein.
 
 
 0.689
AOP53317.1
Two-component system response regulator.
 
 
 0.681
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.