Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AOP55250.1Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1. (363 aa)    
Predicted Functional Partners:
AOP55249.1
Oligopeptide transport system permease protein OppC; TCDB 3.A.1.5.1.
 0.997
AOP55252.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA; TCDB 3.A.1.5.1.
 
 0.993
AOP52579.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
 0.988
AOP54782.1
Oligopeptide transport system permease protein OppC; TCDB 3.A.1.5.1.
 0.987
AOP52999.1
ABC transporter, substrate binding protein.
 0.977
AOP53374.1
Dipeptide transport ATP-binding protein DppD; TCDB 3.A.1.5.2; Belongs to the ABC transporter superfamily.
 0.968
AOP55248.1
Dipeptide transport ATP-binding protein DppD; TCDB 3.A.1.5.2; Belongs to the ABC transporter superfamily.
 
 0.964
AOP52580.1
Dipeptide transport system permease protein DppB; TCDB 3.A.1.5.2.
  
  
 
0.927
AOP54783.1
Dipeptide transport system permease protein DppB; TCDB 3.A.1.5.2.
  
  
 
0.923
AOP53000.1
Dipeptide transport system permease protein DppB; TCDB 3.A.1.5.2.
  
  
 
0.916
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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