Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AOP55269.1ABC transporter, ATP-binding protein. (293 aa)    
Predicted Functional Partners:
AOP55268.1
Putative ABC transporter permease.
 
  
 0.965
AOP55441.1
Membrane protein, putative.
 
  
 0.871
AOP53922.1
ABC transporter, ATP-binding protein.
 
     0.739
AOP53622.1
ABC transporter ATP-binding protein.
 
     0.682
AOP55267.1
Putative RNA METHYLTRANSFERASE (RNA METHYLASE).
       0.646
AOP53588.1
TCDB 3.A.1.8.1; TCDB 3.A.1.8.1; Molybdenum transport ATP-binding protein ModC.
 
    
0.475
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.474
AOP54770.1
Hypothetical protein.
 
     0.445
AOP53696.1
DNA polymerase III epsilon subunit-related protein.
 
     0.418
AOP53586.1
Molybdate-binding domain of ModE.
 
     0.414
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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