STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55316.1Propionate--CoA ligase; Acetyl-coenzyme A synthetase. (649 aa)    
Predicted Functional Partners:
AOP52758.1
Sodium-solute symporter, putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.590
AOP55315.1
Short chain dehydrogenase.
  
    0.574
AOP51995.1
Fumarate hydratase class I.
  
  
 0.552
AOP52745.1
2-methylcitrate dehydratase.
  
  
 0.552
AOP53982.1
Transcriptional regulator.
   
   0.540
AOP52757.1
Putative membrane protein.
  
    0.523
AOP53448.1
Putative transcriptional regulator.
   
 
 0.522
AOP55003.1
Putative DNA-binding protein in cluster with Type I restriction-modification system.
   
 
 0.522
AOP52746.1
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.
  
  
 0.510
AOP52572.1
Hypothetical protein.
      0.507
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.