STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55407.1Trehalose-6-phosphate phosphatase. (881 aa)    
Predicted Functional Partners:
AOP52224.1
Alpha,alpha-trehalose-phosphate synthase [UDP-forming].
 
 0.958
AOP54968.1
Alpha,alpha-trehalose-phosphate synthase [UDP-forming].
 
 0.957
AOP55137.1
Hypothetical protein; FIG00449467.
  
 
 0.728
AOP53854.1
Glucose-6-phosphate isomerase.
 
  
 0.665
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
 
  
 0.591
AOP51863.1
Glucose-6-phosphate 1-dehydrogenase.
 
  
 0.578
AOP53852.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
  
 0.566
AOP55408.1
Hypothetical protein.
       0.529
AOP53876.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.524
AOP51879.1
Membrane protein; FIG00761799.
   
   0.510
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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