STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55432.1Hypothetical protein; FIG111991. (294 aa)    
Predicted Functional Partners:
AOP55431.1
RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.948
AOP55430.1
Cell surface lipoprotein MPT83 precursor.
 
   
 0.898
AOP55429.1
Putative sulfite oxidase.
 
     0.721
AOP53055.1
Putative sulfite oxidase.
 
     0.600
AOP55433.1
Putative two-component system sensor kinase.
       0.490
AOP55434.1
Putative two-component system response regulator.
       0.490
AOP54815.1
Deoxyribodipyrimidine photolyase.
 
     0.485
AOP54144.1
USG protein.
     
 0.470
AOP52773.1
Cytochrome c-type biogenesis protein CcdA (DsbD-like protein).
     
 0.465
AOP53924.1
Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
     0.456
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.